Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 AL353779.1-201ENST00000434793 351 ntBASIC16.17■□□□□ 0.18
TRIM11Q96F44 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 DOC2GP-202ENST00000514950 1163 ntBASIC16.17■□□□□ 0.18
TRIM11Q96F44 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 TPRX2P-201ENST00000535362 881 ntBASIC16.17■□□□□ 0.18
TRIM11Q96F44 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 AL049840.4-201ENST00000602422 811 ntBASIC16.17■□□□□ 0.18
TRIM11Q96F44 AC107373.2-201ENST00000607735 490 ntBASIC16.17■□□□□ 0.18
TRIM11Q96F44 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
TRIM11Q96F44 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM11Q96F44 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 AC067750.1-201ENST00000608826 6545 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 AL359258.3-201ENST00000622910 2331 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 NUS1P3-201ENST00000423502 862 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 LINC00552-201ENST00000625151 2579 ntBASIC16.16■□□□□ 0.18
TRIM11Q96F44 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM11Q96F44 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM11Q96F44 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM11Q96F44 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM11Q96F44 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms