Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 AC006033.1-201ENST00000440505 426 ntBASIC16.52■□□□□ 0.24
PGBD4Q96DM1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 AL022328.3-201ENST00000607943 679 ntBASIC16.52■□□□□ 0.24
PGBD4Q96DM1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.52■□□□□ 0.24
PGBD4Q96DM1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PGBD4Q96DM1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PGBD4Q96DM1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 MIR1247-201ENST00000408206 136 ntBASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 AC099548.2-209ENST00000480264 625 ntBASIC16.51■□□□□ 0.23
PGBD4Q96DM1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 C2orf69P2-201ENST00000562032 1123 ntBASIC16.51■□□□□ 0.23
PGBD4Q96DM1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD4Q96DM1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.51■□□□□ 0.23
PGBD4Q96DM1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AC105250.1-201ENST00000509378 2057 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 GPAA1P2-201ENST00000417923 928 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AL591846.1-201ENST00000451736 433 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AC104306.2-201ENST00000451877 341 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 KRT8P13-201ENST00000463294 1010 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD4Q96DM1 COX5BP1-201ENST00000507622 393 ntBASIC16.5■□□□□ 0.23
PGBD4Q96DM1 AP001258.2-201ENST00000529891 490 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms