Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ULK4Q96C45 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ULK4Q96C45 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ULK4Q96C45 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ULK4Q96C45 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.3■□□□□ 0.04
ULK4Q96C45 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
ULK4Q96C45 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ULK4Q96C45 CICP11-201ENST00000434745 2827 ntBASIC15.3■□□□□ 0.04
ULK4Q96C45 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ULK4Q96C45 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
ULK4Q96C45 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.29■□□□□ 0.04
ULK4Q96C45 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 AL138799.1-201ENST00000448213 1675 ntBASIC15.29■□□□□ 0.04
ULK4Q96C45 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ULK4Q96C45 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
ULK4Q96C45 AC098850.1-201ENST00000419919 790 ntBASIC15.29■□□□□ 0.04
ULK4Q96C45 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.29■□□□□ 0.04
ULK4Q96C45 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
ULK4Q96C45 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 ELK1P1-201ENST00000485699 580 ntBASIC15.29■□□□□ 0.04
ULK4Q96C45 SPDYE22P-201ENST00000582158 798 ntBASIC15.29■□□□□ 0.04
ULK4Q96C45 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ULK4Q96C45 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.29■□□□□ 0.04
ULK4Q96C45 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ULK4Q96C45 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 MROH4P-201ENST00000431302 1578 ntBASIC15.28■□□□□ 0.04
ULK4Q96C45 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ULK4Q96C45 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 AC012508.2-201ENST00000567613 1472 ntBASIC15.28■□□□□ 0.04
ULK4Q96C45 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 AL645937.2-201ENST00000396808 931 ntBASIC15.28■□□□□ 0.04
ULK4Q96C45 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.28■□□□□ 0.04
ULK4Q96C45 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.28■□□□□ 0.04
ULK4Q96C45 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 AC124283.3-201ENST00000570869 594 ntBASIC15.28■□□□□ 0.04
ULK4Q96C45 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ULK4Q96C45 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ULK4Q96C45 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ULK4Q96C45 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ULK4Q96C45 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms