Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CPNE4Q96A23 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CPNE4Q96A23 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE4Q96A23 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPNE4Q96A23 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.75□□□□□ -0.21
CPNE4Q96A23 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 AC112693.3-201ENST00000624819 1983 ntBASIC13.75□□□□□ -0.21
CPNE4Q96A23 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.75□□□□□ -0.21
CPNE4Q96A23 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 CLUHP6-201ENST00000580789 941 ntBASIC13.75□□□□□ -0.21
CPNE4Q96A23 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.75□□□□□ -0.21
CPNE4Q96A23 AC007787.1-201ENST00000588095 1583 ntBASIC13.75□□□□□ -0.21
CPNE4Q96A23 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPNE4Q96A23 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 CICP11-201ENST00000434745 2827 ntBASIC13.74□□□□□ -0.21
CPNE4Q96A23 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC148477.4-201ENST00000613430 1793 ntBASIC13.74□□□□□ -0.21
CPNE4Q96A23 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC114812.1-204ENST00000449669 728 ntBASIC13.74□□□□□ -0.21
CPNE4Q96A23 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.74□□□□□ -0.21
CPNE4Q96A23 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPNE4Q96A23 AC022137.2-201ENST00000503482 481 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms