Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 AC025271.4-201ENST00000621477 1726 ntBASIC18.43■□□□□ 0.54
CNKSR1Q969H4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR1Q969H4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 AL157813.1-201ENST00000612996 587 ntBASIC18.42■□□□□ 0.54
CNKSR1Q969H4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 AL391005.1-201ENST00000623953 2435 ntBASIC18.42■□□□□ 0.54
CNKSR1Q969H4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR1Q969H4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC092127.1-201ENST00000567093 3455 ntBASIC18.41■□□□□ 0.54
CNKSR1Q969H4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 AC005632.3-201ENST00000605544 308 ntBASIC18.41■□□□□ 0.54
CNKSR1Q969H4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 FRMPD2B-201ENST00000431305 1347 ntBASIC18.41■□□□□ 0.54
CNKSR1Q969H4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CNKSR1Q969H4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms