Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.17■□□□□ 0.34
USP6NLQ92738 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP6NLQ92738 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP6NLQ92738 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 REXO1L5P-201ENST00000622260 2098 ntBASIC17.16■□□□□ 0.34
USP6NLQ92738 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.16■□□□□ 0.34
USP6NLQ92738 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.16■□□□□ 0.34
USP6NLQ92738 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.16■□□□□ 0.34
USP6NLQ92738 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 AC104784.1-201ENST00000473096 294 ntBASIC17.16■□□□□ 0.34
USP6NLQ92738 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.16■□□□□ 0.34
USP6NLQ92738 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 IQSEC3P1-201ENST00000538799 536 ntBASIC17.16■□□□□ 0.34
USP6NLQ92738 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.16■□□□□ 0.34
USP6NLQ92738 AL136301.1-201ENST00000615830 422 ntBASIC17.16■□□□□ 0.34
USP6NLQ92738 AP003419.4-201ENST00000616071 517 ntBASIC17.16■□□□□ 0.34
USP6NLQ92738 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.16■□□□□ 0.34
USP6NLQ92738 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP6NLQ92738 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
USP6NLQ92738 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USP6NLQ92738 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
USP6NLQ92738 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.15■□□□□ 0.34
USP6NLQ92738 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP6NLQ92738 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.15■□□□□ 0.34
USP6NLQ92738 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 AC010141.1-201ENST00000411585 623 ntBASIC17.15■□□□□ 0.34
USP6NLQ92738 RPL18P13-201ENST00000478088 569 ntBASIC17.15■□□□□ 0.34
USP6NLQ92738 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
USP6NLQ92738 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.15■□□□□ 0.34
USP6NLQ92738 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
USP6NLQ92738 AC006453.1-201ENST00000636037 1257 ntBASIC17.15■□□□□ 0.34
USP6NLQ92738 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP6NLQ92738 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP6NLQ92738 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
USP6NLQ92738 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.15■□□□□ 0.34
USP6NLQ92738 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP6NLQ92738 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.14■□□□□ 0.34
USP6NLQ92738 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
USP6NLQ92738 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP6NLQ92738 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.14■□□□□ 0.33
USP6NLQ92738 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP6NLQ92738 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.14■□□□□ 0.33
USP6NLQ92738 ISCA2P1-201ENST00000425548 448 ntBASIC17.14■□□□□ 0.33
USP6NLQ92738 AL353637.1-201ENST00000451571 732 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms