Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGB4Q8WW32 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AL603832.2-201ENST00000566195 2125 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC100850.1-201ENST00000506768 649 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC016629.1-201ENST00000596579 586 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC015967.2-201ENST00000624092 234 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AC006435.4-201ENST00000625037 234 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 AL356737.1-201ENST00000634391 234 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 CICP13-201ENST00000422015 2789 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 REXO1L5P-201ENST00000622260 2098 ntBASIC15.26■□□□□ 0.03
HMGB4Q8WW32 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGB4Q8WW32 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 FTLP10-202ENST00000505798 471 ntBASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC091544.8-201ENST00000619490 361 ntBASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC138466.3-201ENST00000619983 221 ntBASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AL645728.2-202ENST00000641679 227 ntBASIC15.25■□□□□ 0.03
HMGB4Q8WW32 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGB4Q8WW32 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms