Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC079776.1-201ENST00000401540 1152 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ARSEP1-201ENST00000420443 635 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC093433.1-201ENST00000458048 571 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 IGHV3-71-201ENST00000523324 359 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC018665.1-201ENST00000622927 1362 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC013268.4-201ENST00000637413 2228 ntBASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FNDC9Q8TBE3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ACA64.2-201ENST00000459014 129 ntBASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms