Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 KRT8P35-201ENST00000483942 1338 ntBASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 MIR5189-201ENST00000577370 114 ntBASIC16.25■□□□□ 0.19
LMO3Q8TAP4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 AC025048.6-201ENST00000634326 1161 ntBASIC16.25■□□□□ 0.19
LMO3Q8TAP4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 AL009178.2-201ENST00000597278 2719 ntBASIC16.25■□□□□ 0.19
LMO3Q8TAP4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMO3Q8TAP4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC012441.1-201ENST00000446669 685 ntBASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC009486.1-201ENST00000569860 813 ntBASIC16.24■□□□□ 0.19
LMO3Q8TAP4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.24■□□□□ 0.19
LMO3Q8TAP4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms