Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 CCDC81-201ENST00000354755 2510 ntTSL 2 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 PKNOX2-201ENST00000298282 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC9.24□□□□□ -0.93
SVIPQ8NHG7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 PTGR2-201ENST00000267568 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 AL591742.2-201ENST00000632517 2119 ntBASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 RUNX1T1-202ENST00000360348 2370 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 APBB2-214ENST00000508593 3592 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 BFAR-207ENST00000563971 1662 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SLC4A9-205ENST00000507527 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 USP9YP3-201ENST00000434481 1766 ntBASIC9.23□□□□□ -0.93
SVIPQ8NHG7 C17orf82-201ENST00000623772 1530 ntBASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 TMEM198B-204ENST00000484016 896 ntBASIC9.23□□□□□ -0.93
SVIPQ8NHG7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CHRM1-201ENST00000306960 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 C16orf62-203ENST00000438132 3855 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC9.23□□□□□ -0.93
SVIPQ8NHG7 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SVIPQ8NHG7 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms