Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 AL627223.1-201ENST00000416693 442 ntBASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SLC25A39P2-201ENST00000537614 270 ntBASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PIK3C3Q8NEB9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 CNN2P11-201ENST00000429351 262 ntBASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 RARRES2P9-201ENST00000565168 469 ntBASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PIK3C3Q8NEB9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms