Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 AC006449.5-201ENST00000610658 2098 ntBASIC16.65■□□□□ 0.26
PCSK9Q8NBP7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCSK9Q8NBP7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
PCSK9Q8NBP7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCSK9Q8NBP7 MBLAC2-202ENST00000514906 1936 ntBASIC16.64■□□□□ 0.26
PCSK9Q8NBP7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCSK9Q8NBP7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 REXO1L4P-201ENST00000605109 1937 ntBASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 KLF2P1-201ENST00000447438 1042 ntBASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 RN7SL181P-201ENST00000462921 277 ntBASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 SCARNA21-201ENST00000517026 139 ntBASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 AC051619.9-201ENST00000623237 597 ntBASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCSK9Q8NBP7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms