Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 PDIA3P1-201ENST00000471856 1510 ntBASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC33Q8N5R6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 FAM86MP-201ENST00000340703 885 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 BCRP2-202ENST00000447763 634 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 BCRP6-201ENST00000510112 632 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 BCRP7-201ENST00000511549 544 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 MIR5189-201ENST00000577370 114 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC084364.1-201ENST00000551967 1556 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC148477.4-201ENST00000613430 1793 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC007686.3-201ENST00000619017 3487 ntBASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC33Q8N5R6 AC126755.1-201ENST00000525846 6405 ntBASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 TCAF2P1-201ENST00000291129 2421 ntBASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms