Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC073413.1-201ENST00000603927 732 ntBASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC097724.1-201ENST00000609581 426 ntBASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 KRT8P29-201ENST00000420409 1371 ntBASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SYNPOQ8N3V7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.46■□□□□ 0.06
SYNPOQ8N3V7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SYNPOQ8N3V7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.46■□□□□ 0.06
SYNPOQ8N3V7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.46■□□□□ 0.06
SYNPOQ8N3V7 AC126177.1-201ENST00000547829 2218 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 FXNP2-201ENST00000411625 547 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 EIF3FP3-201ENST00000434851 1086 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 MPRIPP1-201ENST00000452433 1089 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 IMP3P2-201ENST00000489760 475 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 MIR4722-201ENST00000578292 60 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 AP001002.3-201ENST00000623482 206 ntBASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.45■□□□□ 0.06
SYNPOQ8N3V7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AC011742.3-201ENST00000439053 820 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 FTLP10-202ENST00000505798 471 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 SAMD11P1-201ENST00000571429 661 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms