Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC130686.1-201ENST00000622936 2466 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC004945.1-201ENST00000416738 983 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 PAWRP1-201ENST00000451083 565 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AL591684.3-201ENST00000605187 298 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC092119.3-201ENST00000612618 583 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SIGLEC16-201ENST00000599858 1437 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 INTS4P1-201ENST00000438455 1935 ntBASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 UPK3BP1-201ENST00000428678 509 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 NCF1C-201ENST00000438382 1427 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 KRT16P4-201ENST00000453883 522 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 AC087163.2-201ENST00000457299 853 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 AC005412.3-201ENST00000580309 715 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 AL445228.2-201ENST00000605589 952 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
KCNIP4Q6PIL6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms