Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL357563.1-201ENST00000404728 395 ntBASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 AC079112.1-201ENST00000454972 939 ntBASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 PCDHA1-201ENST00000378133 2726 ntBASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 MVK-217ENST00000639206 367 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42BPAQ5VT25 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 BANF1P3-201ENST00000412556 261 ntBASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AC026410.1-201ENST00000507366 1101 ntBASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AC107464.3-201ENST00000609172 737 ntBASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CDC42BPAQ5VT25 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 LINC01783-202ENST00000614408 828 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 BX284668.2-205ENST00000619677 828 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 MIR6858-201ENST00000620733 67 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AC136621.1-201ENST00000624017 2304 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AC090502.4-201ENST00000551714 1386 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 PIN4P1-201ENST00000451079 396 ntBASIC22.4■■□□□ 1.18
CDC42BPAQ5VT25 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 LINC01101-201ENST00000622953 1884 ntBASIC22.39■■□□□ 1.18
CDC42BPAQ5VT25 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDC42BPAQ5VT25 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms