Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC153Q494R4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC153Q494R4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC153Q494R4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC153Q494R4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC153Q494R4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC153Q494R4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC153Q494R4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC153Q494R4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC153Q494R4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AC005252.3-201ENST00000623855 2258 ntBASIC15.15■□□□□ 0.02
CCDC153Q494R4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 YBX1P5-201ENST00000509441 847 ntBASIC15.15■□□□□ 0.02
CCDC153Q494R4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 MIR6080-201ENST00000617359 66 ntBASIC15.15■□□□□ 0.02
CCDC153Q494R4 AC009093.7-201ENST00000623853 1223 ntBASIC15.15■□□□□ 0.02
CCDC153Q494R4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC153Q494R4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 SAMD11P1-201ENST00000571429 661 ntBASIC15.14■□□□□ 0.01
CCDC153Q494R4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 AC004835.2-201ENST00000603762 682 ntBASIC15.14■□□□□ 0.01
CCDC153Q494R4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 AC015656.1-201ENST00000624209 3578 ntBASIC15.14■□□□□ 0.01
CCDC153Q494R4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC153Q494R4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC153Q494R4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms