Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.96□□□□□ -0.34
COL10A1Q03692 AL137784.3-201ENST00000623858 2288 ntBASIC12.96□□□□□ -0.34
COL10A1Q03692 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 CICP24-201ENST00000605464 2705 ntBASIC12.96□□□□□ -0.34
COL10A1Q03692 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL10A1Q03692 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.96□□□□□ -0.34
COL10A1Q03692 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 SPDYE19P-201ENST00000338590 713 ntBASIC12.95□□□□□ -0.34
COL10A1Q03692 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 GHSR-202ENST00000427970 912 ntBASIC12.95□□□□□ -0.34
COL10A1Q03692 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.95□□□□□ -0.34
COL10A1Q03692 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.95□□□□□ -0.34
COL10A1Q03692 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.95□□□□□ -0.34
COL10A1Q03692 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 OR2I1P-210ENST00000642037 4691 ntBASIC12.95□□□□□ -0.34
COL10A1Q03692 CLK3P2-201ENST00000427566 1453 ntBASIC12.95□□□□□ -0.34
COL10A1Q03692 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL10A1Q03692 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL10A1Q03692 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COL10A1Q03692 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 WASH3P-207ENST00000560956 1394 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.94□□□□□ -0.34
COL10A1Q03692 MROH4P-201ENST00000431302 1578 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
COL10A1Q03692 AC023310.3-201ENST00000557027 670 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 AC100756.1-201ENST00000562736 682 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 AC138749.3-201ENST00000567691 622 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 AC036164.1-201ENST00000570544 333 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
COL10A1Q03692 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.94□□□□□ -0.34
COL10A1Q03692 AC116165.1-201ENST00000611806 668 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 AC004790.1-201ENST00000612686 536 ntBASIC12.94□□□□□ -0.34
COL10A1Q03692 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL10A1Q03692 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms