Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AP001059.3-201ENST00000619053 235 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 AL928921.2-201ENST00000641325 2442 ntBASIC10.95□□□□□ -0.66
UBE2D3P61077 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
UBE2D3P61077 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D3P61077 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D3P61077 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D3P61077 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D3P61077 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UBE2D3P61077 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
UBE2D3P61077 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
UBE2D3P61077 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2D3P61077 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AC140479.7-201ENST00000636301 2332 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2D3P61077 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
UBE2D3P61077 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AC010327.4-202ENST00000591484 748 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AL589739.1-201ENST00000607720 493 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 CETN4P-206ENST00000642099 2168 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.94□□□□□ -0.66
UBE2D3P61077 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.94□□□□□ -0.66
UBE2D3P61077 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UBE2D3P61077 HSPA7-201ENST00000445535 1927 ntBASIC10.94□□□□□ -0.66
UBE2D3P61077 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.93□□□□□ -0.66
UBE2D3P61077 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UBE2D3P61077 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms