Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN12P56749 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN12P56749 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.34□□□□□ -0.27
CLDN12P56749 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLDN12P56749 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN12P56749 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLDN12P56749 SPCS2P4-201ENST00000436160 681 ntBASIC13.34□□□□□ -0.27
CLDN12P56749 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN12P56749 AC243562.1-201ENST00000560672 389 ntBASIC13.34□□□□□ -0.27
CLDN12P56749 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN12P56749 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDN12P56749 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLDN12P56749 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDN12P56749 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
CLDN12P56749 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDN12P56749 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDN12P56749 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN12P56749 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN12P56749 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDN12P56749 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN12P56749 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN12P56749 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDN12P56749 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDN12P56749 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN12P56749 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN12P56749 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN12P56749 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
CLDN12P56749 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDN12P56749 AC145285.3-201ENST00000564603 959 ntBASIC13.33□□□□□ -0.28
CLDN12P56749 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN12P56749 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms