Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN5P54829 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PTPN5P54829 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PTPN5P54829 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN5P54829 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN5P54829 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN5P54829 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTPN5P54829 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN5P54829 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN5P54829 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN5P54829 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTPN5P54829 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 TARDBPP1-201ENST00000442013 1203 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 NOC2LP1-201ENST00000450578 752 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.78■□□□□ 0.12
PTPN5P54829 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 AC016180.1-201ENST00000567945 403 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN5P54829 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.78■□□□□ 0.12
PTPN5P54829 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 AP001527.2-201ENST00000614441 631 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 AC100757.4-201ENST00000626934 759 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN5P54829 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 AC007950.2-201ENST00000615045 2347 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 AC063926.3-201ENST00000624734 5658 ntBASIC15.78■□□□□ 0.12
PTPN5P54829 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN5P54829 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN5P54829 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTPN5P54829 AC018892.3-201ENST00000623986 2499 ntBASIC15.77■□□□□ 0.12
PTPN5P54829 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PTPN5P54829 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTPN5P54829 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN5P54829 AL035696.2-201ENST00000407941 709 ntBASIC15.77■□□□□ 0.12
PTPN5P54829 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.77■□□□□ 0.12
PTPN5P54829 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.77■□□□□ 0.12
PTPN5P54829 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTPN5P54829 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms