Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LBX1P52954 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.77■□□□□ 0.27
LBX1P52954 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 AC084364.1-201ENST00000551967 1556 ntBASIC16.77■□□□□ 0.27
LBX1P52954 WASH3P-207ENST00000560956 1394 ntBASIC16.77■□□□□ 0.27
LBX1P52954 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 AL360270.3-201ENST00000609118 1348 ntBASIC16.76■□□□□ 0.27
LBX1P52954 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LBX1P52954 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 MED15P3-201ENST00000413613 326 ntBASIC16.76■□□□□ 0.27
LBX1P52954 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.76■□□□□ 0.27
LBX1P52954 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.76■□□□□ 0.27
LBX1P52954 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.76■□□□□ 0.27
LBX1P52954 AC015912.3-201ENST00000619432 348 ntBASIC16.76■□□□□ 0.27
LBX1P52954 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.76■□□□□ 0.27
LBX1P52954 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LBX1P52954 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LBX1P52954 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.76■□□□□ 0.27
LBX1P52954 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LBX1P52954 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.76■□□□□ 0.27
LBX1P52954 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
LBX1P52954 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LBX1P52954 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LBX1P52954 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.75■□□□□ 0.27
LBX1P52954 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LBX1P52954 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 PYY2-201ENST00000315776 282 ntBASIC16.75■□□□□ 0.27
LBX1P52954 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.75■□□□□ 0.27
LBX1P52954 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.75■□□□□ 0.27
LBX1P52954 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.75■□□□□ 0.27
LBX1P52954 RN7SL69P-201ENST00000468423 272 ntBASIC16.75■□□□□ 0.27
LBX1P52954 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.75■□□□□ 0.27
LBX1P52954 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.75■□□□□ 0.27
LBX1P52954 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LBX1P52954 AC005915.1-201ENST00000624912 2018 ntBASIC16.75■□□□□ 0.27
LBX1P52954 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.75■□□□□ 0.27
LBX1P52954 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.75■□□□□ 0.27
LBX1P52954 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.75■□□□□ 0.27
LBX1P52954 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
LBX1P52954 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.74■□□□□ 0.27
LBX1P52954 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LBX1P52954 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms