Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 AC006001.1-201ENST00000325130 474 ntBASIC17.19■□□□□ 0.34
USP11P51784 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 POM121L8P-201ENST00000417732 1281 ntBASIC17.19■□□□□ 0.34
USP11P51784 POM121L9P-203ENST00000441984 1285 ntBASIC17.19■□□□□ 0.34
USP11P51784 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 KLF2P4-201ENST00000451959 1225 ntBASIC17.19■□□□□ 0.34
USP11P51784 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.19■□□□□ 0.34
USP11P51784 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.19■□□□□ 0.34
USP11P51784 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.19■□□□□ 0.34
USP11P51784 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.19■□□□□ 0.34
USP11P51784 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.19■□□□□ 0.34
USP11P51784 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.19■□□□□ 0.34
USP11P51784 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.19■□□□□ 0.34
USP11P51784 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.19■□□□□ 0.34
USP11P51784 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP11P51784 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP11P51784 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 TPM3P8-201ENST00000330554 643 ntBASIC17.18■□□□□ 0.34
USP11P51784 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.18■□□□□ 0.34
USP11P51784 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.18■□□□□ 0.34
USP11P51784 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 AC022210.1-201ENST00000449856 793 ntBASIC17.18■□□□□ 0.34
USP11P51784 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.18■□□□□ 0.34
USP11P51784 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.18■□□□□ 0.34
USP11P51784 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 AC017083.2-201ENST00000608069 979 ntBASIC17.18■□□□□ 0.34
USP11P51784 MIR6775-201ENST00000617557 69 ntBASIC17.18■□□□□ 0.34
USP11P51784 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.18■□□□□ 0.34
USP11P51784 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP11P51784 TNRC18P2-201ENST00000417666 2714 ntBASIC17.18■□□□□ 0.34
USP11P51784 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP11P51784 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
USP11P51784 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP11P51784 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP11P51784 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP11P51784 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP11P51784 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.17■□□□□ 0.34
USP11P51784 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.17■□□□□ 0.34
USP11P51784 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP11P51784 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms