Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HADHAP40939 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHAP40939 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HADHAP40939 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHAP40939 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 TSPY16P-201ENST00000449843 468 ntBASIC15.5■□□□□ 0.07
HADHAP40939 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHAP40939 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HADHAP40939 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.5■□□□□ 0.07
HADHAP40939 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHAP40939 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHAP40939 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.5■□□□□ 0.07
HADHAP40939 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
HADHAP40939 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HADHAP40939 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.5■□□□□ 0.07
HADHAP40939 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HADHAP40939 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 AL009178.2-201ENST00000597278 2719 ntBASIC15.49■□□□□ 0.07
HADHAP40939 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 REXO1L2P-201ENST00000425429 2069 ntBASIC15.49■□□□□ 0.07
HADHAP40939 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 CLK3P2-201ENST00000427566 1453 ntBASIC15.49■□□□□ 0.07
HADHAP40939 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HADHAP40939 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 COX20P2-201ENST00000452636 358 ntBASIC15.49■□□□□ 0.07
HADHAP40939 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 UGT1A2P-201ENST00000454886 866 ntBASIC15.49■□□□□ 0.07
HADHAP40939 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 RPL13AP25-201ENST00000484130 612 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.49■□□□□ 0.07
HADHAP40939 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 AC055876.2-201ENST00000531834 546 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 AC023310.3-201ENST00000557027 670 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC100756.1-201ENST00000562736 682 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC138749.3-201ENST00000567691 622 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.49■□□□□ 0.07
HADHAP40939 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 AC116165.1-201ENST00000611806 668 ntBASIC15.49■□□□□ 0.07
HADHAP40939 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.49■□□□□ 0.07
HADHAP40939 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HADHAP40939 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HADHAP40939 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms