Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
EPHA3P29320 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.92□□□□□ -0.02
EPHA3P29320 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.92□□□□□ -0.02
EPHA3P29320 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.92□□□□□ -0.02
EPHA3P29320 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 RN7SL828P-201ENST00000607615 303 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
EPHA3P29320 C20orf181-201ENST00000623918 480 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 AC138969.3-201ENST00000546612 1459 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 AC138932.2-201ENST00000548268 1459 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 AC126755.4-201ENST00000549796 1459 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 AC007787.1-201ENST00000588095 1583 ntBASIC14.92□□□□□ -0.02
EPHA3P29320 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
EPHA3P29320 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.92□□□□□ -0.02
EPHA3P29320 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.92□□□□□ -0.02
EPHA3P29320 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.92□□□□□ -0.02
EPHA3P29320 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
EPHA3P29320 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.91□□□□□ -0.02
EPHA3P29320 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.91□□□□□ -0.02
EPHA3P29320 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EPHA3P29320 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.91□□□□□ -0.02
EPHA3P29320 FAM58DP-201ENST00000428076 619 ntBASIC14.91□□□□□ -0.02
EPHA3P29320 AC005237.2-201ENST00000434368 219 ntBASIC14.91□□□□□ -0.02
EPHA3P29320 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.91□□□□□ -0.02
EPHA3P29320 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.91□□□□□ -0.02
EPHA3P29320 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
EPHA3P29320 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
EPHA3P29320 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.91□□□□□ -0.02
EPHA3P29320 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
EPHA3P29320 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 AC025181.2-201ENST00000606994 802 ntBASIC14.91□□□□□ -0.02
EPHA3P29320 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.91□□□□□ -0.02
EPHA3P29320 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.91□□□□□ -0.02
EPHA3P29320 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.91□□□□□ -0.02
EPHA3P29320 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.91□□□□□ -0.02
EPHA3P29320 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
EPHA3P29320 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EPHA3P29320 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EPHA3P29320 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 AC152010.1-201ENST00000415779 2006 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 AL133267.1-201ENST00000398220 340 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 AC104457.1-201ENST00000401024 814 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.9□□□□□ -0.02
EPHA3P29320 MTND6P24-201ENST00000440466 518 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EPHA3P29320 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.9□□□□□ -0.02
EPHA3P29320 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.9□□□□□ -0.02
EPHA3P29320 AC040169.1-201ENST00000565382 521 ntBASIC14.9□□□□□ -0.02
EPHA3P29320 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.9□□□□□ -0.02
EPHA3P29320 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms