Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC010327.5-201ENST00000586923 3061 ntBASIC12.85□□□□□ -0.35
LMO1P25800 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO1P25800 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO1P25800 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO1P25800 AC007787.1-201ENST00000588095 1583 ntBASIC12.85□□□□□ -0.35
LMO1P25800 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 AL360270.3-201ENST00000609118 1348 ntBASIC12.85□□□□□ -0.35
LMO1P25800 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LMO1P25800 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LMO1P25800 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO1P25800 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 AC136759.1-202ENST00000530858 2194 ntBASIC12.84□□□□□ -0.35
LMO1P25800 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 RPL13AP25-201ENST00000484130 612 ntBASIC12.84□□□□□ -0.35
LMO1P25800 TPRX2P-201ENST00000535362 881 ntBASIC12.84□□□□□ -0.35
LMO1P25800 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO1P25800 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO1P25800 AC104794.3-201ENST00000566840 1248 ntBASIC12.84□□□□□ -0.35
LMO1P25800 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 AC239800.4-201ENST00000603712 296 ntBASIC12.84□□□□□ -0.35
LMO1P25800 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LMO1P25800 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO1P25800 AC093525.8-201ENST00000624099 1342 ntBASIC12.84□□□□□ -0.35
LMO1P25800 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO1P25800 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
LMO1P25800 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.83□□□□□ -0.35
LMO1P25800 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.83□□□□□ -0.35
LMO1P25800 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LMO1P25800 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO1P25800 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO1P25800 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO1P25800 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.83□□□□□ -0.35
LMO1P25800 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.83□□□□□ -0.36
LMO1P25800 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.83□□□□□ -0.36
LMO1P25800 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LMO1P25800 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LMO1P25800 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LMO1P25800 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.83□□□□□ -0.36
LMO1P25800 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.83□□□□□ -0.36
LMO1P25800 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.83□□□□□ -0.36
LMO1P25800 AC093214.1-201ENST00000511688 1107 ntBASIC12.83□□□□□ -0.36
LMO1P25800 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.83□□□□□ -0.36
LMO1P25800 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.83□□□□□ -0.36
LMO1P25800 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LMO1P25800 AC023310.3-201ENST00000557027 670 ntBASIC12.83□□□□□ -0.36
LMO1P25800 AC100756.1-201ENST00000562736 682 ntBASIC12.83□□□□□ -0.36
LMO1P25800 AC138749.3-201ENST00000567691 622 ntBASIC12.83□□□□□ -0.36
LMO1P25800 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.83□□□□□ -0.36
LMO1P25800 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LMO1P25800 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LMO1P25800 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.83□□□□□ -0.36
LMO1P25800 AC099568.2-201ENST00000609194 695 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms