Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.34□□□□□ -0.27
ACKR3P25106 ACE3P-201ENST00000423435 1973 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 FGD5P1-202ENST00000614866 2498 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.33□□□□□ -0.27
ACKR3P25106 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACKR3P25106 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ACKR3P25106 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACKR3P25106 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACKR3P25106 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACKR3P25106 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.33□□□□□ -0.28
ACKR3P25106 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.33□□□□□ -0.28
ACKR3P25106 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.33□□□□□ -0.28
ACKR3P25106 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.33□□□□□ -0.28
ACKR3P25106 AC092337.1-201ENST00000568699 1129 ntBASIC13.33□□□□□ -0.28
ACKR3P25106 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
ACKR3P25106 AL390754.1-201ENST00000619088 582 ntBASIC13.33□□□□□ -0.28
ACKR3P25106 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.33□□□□□ -0.28
ACKR3P25106 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ACKR3P25106 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACKR3P25106 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ACKR3P25106 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.32□□□□□ -0.28
ACKR3P25106 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ACKR3P25106 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ACKR3P25106 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.32□□□□□ -0.28
ACKR3P25106 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ACKR3P25106 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.32□□□□□ -0.28
ACKR3P25106 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 SPDYE18-201ENST00000510091 1050 ntBASIC13.32□□□□□ -0.28
ACKR3P25106 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.32□□□□□ -0.28
ACKR3P25106 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.32□□□□□ -0.28
ACKR3P25106 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 AC000095.1-201ENST00000603208 874 ntBASIC13.32□□□□□ -0.28
ACKR3P25106 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
ACKR3P25106 REXO1L4P-201ENST00000605109 1937 ntBASIC13.32□□□□□ -0.28
ACKR3P25106 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACKR3P25106 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms