Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 Z97205.2-201ENST00000564697 1639 ntBASIC13□□□□□ -0.33
HIST1H1DP16402 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1DP16402 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 AC005237.2-201ENST00000434368 219 ntBASIC13□□□□□ -0.33
HIST1H1DP16402 MKNK2P1-201ENST00000437526 628 ntBASIC13□□□□□ -0.33
HIST1H1DP16402 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1DP16402 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13□□□□□ -0.33
HIST1H1DP16402 AC040169.1-201ENST00000565382 521 ntBASIC13□□□□□ -0.33
HIST1H1DP16402 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13□□□□□ -0.33
HIST1H1DP16402 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 AC007967.4-201ENST00000614700 386 ntBASIC13□□□□□ -0.33
HIST1H1DP16402 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13□□□□□ -0.33
HIST1H1DP16402 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13□□□□□ -0.33
HIST1H1DP16402 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HIST1H1DP16402 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 LILRP1-201ENST00000444199 1370 ntBASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 KRT18P32-201ENST00000424695 1287 ntBASIC12.99□□□□□ -0.33
HIST1H1DP16402 KRT18P64-201ENST00000434946 1219 ntBASIC12.99□□□□□ -0.33
HIST1H1DP16402 MTND6P24-201ENST00000440466 518 ntBASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 MIR6069-201ENST00000620069 79 ntBASIC12.99□□□□□ -0.33
HIST1H1DP16402 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
HIST1H1DP16402 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HIST1H1DP16402 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms