Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL161773.1-201ENST00000624845 863 ntBASIC25.93■■□□□ 1.74
TOP2AP11388 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TOP2AP11388 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
TOP2AP11388 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TOP2AP11388 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC25.92■■□□□ 1.74
TOP2AP11388 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 F10-203ENST00000409306 1450 ntTSL 3 BASIC25.92■■□□□ 1.74
TOP2AP11388 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC25.92■■□□□ 1.74
TOP2AP11388 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC25.92■■□□□ 1.74
TOP2AP11388 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC25.92■■□□□ 1.74
TOP2AP11388 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC25.92■■□□□ 1.74
TOP2AP11388 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 AC007326.1-201ENST00000604539 458 ntBASIC25.92■■□□□ 1.74
TOP2AP11388 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
TOP2AP11388 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC25.92■■□□□ 1.74
TOP2AP11388 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC25.92■■□□□ 1.74
TOP2AP11388 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TOP2AP11388 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC25.92■■□□□ 1.74
TOP2AP11388 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
TOP2AP11388 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TOP2AP11388 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TOP2AP11388 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
TOP2AP11388 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC25.91■■□□□ 1.74
TOP2AP11388 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TOP2AP11388 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC25.91■■□□□ 1.74
TOP2AP11388 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC25.91■■□□□ 1.74
TOP2AP11388 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
TOP2AP11388 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC25.91■■□□□ 1.74
TOP2AP11388 AC026410.1-201ENST00000507366 1101 ntBASIC25.91■■□□□ 1.74
TOP2AP11388 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC25.91■■□□□ 1.74
TOP2AP11388 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC25.91■■□□□ 1.74
TOP2AP11388 AC107464.3-201ENST00000609172 737 ntBASIC25.91■■□□□ 1.74
TOP2AP11388 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 KHSRPP1-201ENST00000427983 1768 ntBASIC25.91■■□□□ 1.74
TOP2AP11388 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TOP2AP11388 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC25.9■■□□□ 1.74
TOP2AP11388 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC25.9■■□□□ 1.74
TOP2AP11388 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC25.9■■□□□ 1.74
TOP2AP11388 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC25.9■■□□□ 1.74
TOP2AP11388 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC25.9■■□□□ 1.74
TOP2AP11388 PIN4P1-201ENST00000451079 396 ntBASIC25.9■■□□□ 1.74
TOP2AP11388 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC25.9■■□□□ 1.74
TOP2AP11388 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC25.9■■□□□ 1.74
TOP2AP11388 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC25.9■■□□□ 1.74
TOP2AP11388 AC009084.3-201ENST00000623356 437 ntBASIC25.9■■□□□ 1.74
TOP2AP11388 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC25.9■■□□□ 1.74
TOP2AP11388 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 HLA-DQB2-231ENST00000435145 2026 ntBASIC25.9■■□□□ 1.74
TOP2AP11388 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC25.9■■□□□ 1.74
TOP2AP11388 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 AC026471.1-201ENST00000564629 3026 ntBASIC25.9■■□□□ 1.74
TOP2AP11388 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TOP2AP11388 IL9RP3-201ENST00000442856 1674 ntBASIC25.9■■□□□ 1.74
TOP2AP11388 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TOP2AP11388 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
TOP2AP11388 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TOP2AP11388 AC012362.1-201ENST00000434906 739 ntBASIC25.89■■□□□ 1.74
TOP2AP11388 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC25.89■■□□□ 1.74
TOP2AP11388 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TOP2AP11388 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
TOP2AP11388 LINC01101-201ENST00000622953 1884 ntBASIC25.89■■□□□ 1.74
TOP2AP11388 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC25.89■■□□□ 1.74
TOP2AP11388 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TOP2AP11388 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC25.89■■□□□ 1.74
TOP2AP11388 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TOP2AP11388 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC25.89■■□□□ 1.73
TOP2AP11388 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
TOP2AP11388 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TOP2AP11388 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
TOP2AP11388 MARK2P16-201ENST00000605714 1723 ntBASIC25.89■■□□□ 1.73
TOP2AP11388 TMBIM7P-203ENST00000641617 1718 ntBASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms