Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 MIR326-201ENST00000362220 95 ntBASIC11.97□□□□□ -0.49
CD28P10747 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.97□□□□□ -0.49
CD28P10747 AC114812.1-204ENST00000449669 728 ntBASIC11.97□□□□□ -0.49
CD28P10747 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.97□□□□□ -0.49
CD28P10747 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 MIR4741-201ENST00000579822 90 ntBASIC11.97□□□□□ -0.49
CD28P10747 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.97□□□□□ -0.49
CD28P10747 AC132938.4-201ENST00000623835 848 ntBASIC11.97□□□□□ -0.49
CD28P10747 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.97□□□□□ -0.49
CD28P10747 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD28P10747 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CD28P10747 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD28P10747 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.96□□□□□ -0.49
CD28P10747 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.96□□□□□ -0.49
CD28P10747 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CD28P10747 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CD28P10747 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.96□□□□□ -0.49
CD28P10747 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.96□□□□□ -0.49
CD28P10747 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.96□□□□□ -0.49
CD28P10747 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.96□□□□□ -0.49
CD28P10747 RNA5SP486-201ENST00000515961 83 ntBASIC11.96□□□□□ -0.49
CD28P10747 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 ECM1P1-201ENST00000604092 1279 ntBASIC11.96□□□□□ -0.49
CD28P10747 AL118558.3-201ENST00000607414 1079 ntBASIC11.96□□□□□ -0.49
CD28P10747 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 SNX12-206ENST00000622259 661 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.96□□□□□ -0.49
CD28P10747 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CD28P10747 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD28P10747 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
CD28P10747 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms