Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 LINC01101-201ENST00000622953 1884 ntBASIC15.46■□□□□ 0.07
HLA-DQB2P05538 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC027307.3-201ENST00000594262 1100 ntBASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AC010319.3-201ENST00000597028 470 ntBASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AP005019.2-201ENST00000615104 511 ntBASIC15.46■□□□□ 0.07
HLA-DQB2P05538 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQB2P05538 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
HLA-DQB2P05538 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AC098614.1-201ENST00000368528 745 ntBASIC15.45■□□□□ 0.06
HLA-DQB2P05538 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AC114812.1-204ENST00000449669 728 ntBASIC15.45■□□□□ 0.06
HLA-DQB2P05538 RN7SL837P-201ENST00000463010 287 ntBASIC15.45■□□□□ 0.06
HLA-DQB2P05538 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 MIR5189-201ENST00000577370 114 ntBASIC15.45■□□□□ 0.06
HLA-DQB2P05538 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AC106881.1-201ENST00000605849 3329 ntBASIC15.45■□□□□ 0.06
HLA-DQB2P05538 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DQB2P05538 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms