Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.43□□□□□ -0.26
LCATP04180 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LCATP04180 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.43□□□□□ -0.26
LCATP04180 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 ZBED1P1-201ENST00000502364 1930 ntBASIC13.43□□□□□ -0.26
LCATP04180 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LCATP04180 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LCATP04180 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LCATP04180 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.42□□□□□ -0.26
LCATP04180 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 GHSR-202ENST00000427970 912 ntBASIC13.42□□□□□ -0.26
LCATP04180 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.42□□□□□ -0.26
LCATP04180 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.42□□□□□ -0.26
LCATP04180 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 AL589987.1-201ENST00000453380 819 ntBASIC13.42□□□□□ -0.26
LCATP04180 SPDYE18-201ENST00000510091 1050 ntBASIC13.42□□□□□ -0.26
LCATP04180 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.42□□□□□ -0.26
LCATP04180 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.42□□□□□ -0.26
LCATP04180 AC005498.2-205ENST00000593218 784 ntBASIC13.42□□□□□ -0.26
LCATP04180 AC000095.1-201ENST00000603208 874 ntBASIC13.42□□□□□ -0.26
LCATP04180 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 AL158212.4-201ENST00000624062 1286 ntBASIC13.42□□□□□ -0.26
LCATP04180 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
LCATP04180 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.42□□□□□ -0.26
LCATP04180 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LCATP04180 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LCATP04180 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LCATP04180 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.41□□□□□ -0.26
LCATP04180 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.41□□□□□ -0.26
LCATP04180 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.41□□□□□ -0.26
LCATP04180 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LCATP04180 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LCATP04180 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.41□□□□□ -0.26
LCATP04180 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.41□□□□□ -0.26
LCATP04180 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.41□□□□□ -0.26
LCATP04180 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LCATP04180 RNA5SP421-201ENST00000516864 134 ntBASIC13.41□□□□□ -0.26
LCATP04180 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LCATP04180 AC104794.3-201ENST00000566840 1248 ntBASIC13.41□□□□□ -0.26
LCATP04180 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms