Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HMGCRP04035 AC135983.4-201ENST00000564116 1262 ntBASIC17.08■□□□□ 0.32
HMGCRP04035 DUX4L47-201ENST00000566374 394 ntBASIC17.08■□□□□ 0.32
HMGCRP04035 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.08■□□□□ 0.32
HMGCRP04035 SNORD3B-2-202ENST00000571722 791 ntBASIC17.08■□□□□ 0.32
HMGCRP04035 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.08■□□□□ 0.32
HMGCRP04035 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HMGCRP04035 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGCRP04035 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGCRP04035 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCRP04035 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HMGCRP04035 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 FAM58BP-201ENST00000439056 645 ntBASIC17.07■□□□□ 0.32
HMGCRP04035 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.07■□□□□ 0.32
HMGCRP04035 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.07■□□□□ 0.32
HMGCRP04035 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HMGCRP04035 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGCRP04035 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 AC002472.3-201ENST00000640124 621 ntBASIC17.07■□□□□ 0.32
HMGCRP04035 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGCRP04035 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HMGCRP04035 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGCRP04035 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 AC010491.1-201ENST00000563101 2797 ntBASIC17.06■□□□□ 0.32
HMGCRP04035 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 TBC1D3J-201ENST00000620719 1426 ntBASIC17.06■□□□□ 0.32
HMGCRP04035 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGCRP04035 RN7SKP175-201ENST00000408472 289 ntBASIC17.06■□□□□ 0.32
HMGCRP04035 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.06■□□□□ 0.32
HMGCRP04035 AC073150.1-201ENST00000450406 1084 ntBASIC17.06■□□□□ 0.32
HMGCRP04035 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGCRP04035 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGCRP04035 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
HMGCRP04035 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.06■□□□□ 0.32
HMGCRP04035 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HMGCRP04035 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms