Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.07□□□□□ -0.48
TRGV3P03979 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV3P03979 AC133539.2-201ENST00000604757 467 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 AL662799.1-202ENST00000614205 422 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 MIR8072-201ENST00000614241 80 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 INTS4P2-202ENST00000614726 2019 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 AC138035.3-201ENST00000622706 2791 ntBASIC12.07□□□□□ -0.48
TRGV3P03979 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV3P03979 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV3P03979 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV3P03979 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TRGV3P03979 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 C1QBPP1-201ENST00000400117 770 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.06□□□□□ -0.48
TRGV3P03979 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 SOCS2P1-201ENST00000417727 557 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 AC098850.1-201ENST00000419919 790 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.06□□□□□ -0.48
TRGV3P03979 AL442647.2-201ENST00000429864 857 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.06□□□□□ -0.48
TRGV3P03979 AC092552.1-201ENST00000547243 906 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.06□□□□□ -0.48
TRGV3P03979 TP53TG3HP-202ENST00000569755 579 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 BRI3BPP1-201ENST00000594224 787 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TRGV3P03979 TMEM261P1-201ENST00000604899 340 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 AC107373.2-201ENST00000607735 490 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TRGV3P03979 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV3P03979 AC126365.1-201ENST00000578585 1514 ntBASIC12.06□□□□□ -0.48
TRGV3P03979 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRGV3P03979 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV3P03979 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV3P03979 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV3P03979 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV3P03979 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV3P03979 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRGV3P03979 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV3P03979 AC023024.2-201ENST00000623561 1993 ntBASIC12.05□□□□□ -0.48
TRGV3P03979 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms