Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA1P02708 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA1P02708 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA1P02708 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRNA1P02708 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHRNA1P02708 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHRNA1P02708 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNA1P02708 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRNA1P02708 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHRNA1P02708 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 Z97180.1-201ENST00000445173 988 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 AC024681.1-201ENST00000521917 487 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNA1P02708 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNA1P02708 AC100827.2-201ENST00000563214 1194 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRNA1P02708 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 AC100757.4-201ENST00000626934 759 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA1P02708 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 AL138725.1-201ENST00000407347 1314 ntBASIC16.44■□□□□ 0.22
CHRNA1P02708 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNA1P02708 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 DOC2GP-204ENST00000639052 2548 ntBASIC16.43■□□□□ 0.22
CHRNA1P02708 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRNA1P02708 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHRNA1P02708 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 AC011742.3-201ENST00000439053 820 ntBASIC16.43■□□□□ 0.22
CHRNA1P02708 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRNA1P02708 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRNA1P02708 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNA1P02708 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNA1P02708 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHRNA1P02708 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNA1P02708 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.42■□□□□ 0.22
CHRNA1P02708 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA1P02708 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA1P02708 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.42■□□□□ 0.22
CHRNA1P02708 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.42■□□□□ 0.22
CHRNA1P02708 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms