Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 COX5BP8-201ENST00000416911 349 ntBASIC16.4■□□□□ 0.22
HLA-DRAP01903 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 TDH-203ENST00000531764 1110 ntBASIC16.4■□□□□ 0.22
HLA-DRAP01903 AC132938.2-201ENST00000579188 680 ntBASIC16.4■□□□□ 0.22
HLA-DRAP01903 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DRAP01903 AL591163.1-201ENST00000641757 987 ntBASIC16.4■□□□□ 0.22
HLA-DRAP01903 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DRAP01903 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DRAP01903 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
HLA-DRAP01903 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 AC063926.3-201ENST00000624734 5658 ntBASIC16.39■□□□□ 0.21
HLA-DRAP01903 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.39■□□□□ 0.21
HLA-DRAP01903 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 IGHV3-72-202ENST00000621503 303 ntBASIC16.39■□□□□ 0.21
HLA-DRAP01903 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DRAP01903 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DRAP01903 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 CU639417.3-201ENST00000624240 1404 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 ACTBP8-201ENST00000403258 1108 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 AL512384.1-201ENST00000406683 331 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 BAATP1-201ENST00000412284 1225 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 NME2P1-201ENST00000426182 414 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 EIF3FP3-201ENST00000434851 1086 ntBASIC16.38■□□□□ 0.21
HLA-DRAP01903 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DRAP01903 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DRAP01903 AC012441.1-201ENST00000446669 685 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms