Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 AL157414.3-201ENST00000624276 1954 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.73■□□□□ 0.43
CTNND1O60716 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CTNND1O60716 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 AC007950.2-201ENST00000615045 2347 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
CTNND1O60716 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 TSPY26P-202ENST00000565928 3884 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 RNMTL1P1-201ENST00000454103 560 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.72■□□□□ 0.43
CTNND1O60716 AL358472.3-201ENST00000608147 415 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 AC004923.1-202ENST00000642106 209 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 AC068418.2-201ENST00000577309 3703 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNND1O60716 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTNND1O60716 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNND1O60716 MST1L-201ENST00000442552 2185 ntBASIC17.72■□□□□ 0.43
CTNND1O60716 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTNND1O60716 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CTNND1O60716 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTNND1O60716 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 RN7SKP175-201ENST00000408472 289 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNND1O60716 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNND1O60716 GHSR-202ENST00000427970 912 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 AC011742.3-201ENST00000439053 820 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.71■□□□□ 0.43
CTNND1O60716 RN7SL720P-201ENST00000488178 304 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 AC106794.1-201ENST00000506935 792 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNND1O60716 AC013355.1-201ENST00000562625 723 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTNND1O60716 RN7SL163P-201ENST00000583100 276 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.71■□□□□ 0.43
CTNND1O60716 AC005324.6-201ENST00000587972 613 ntBASIC17.71■□□□□ 0.43
CTNND1O60716 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.71■□□□□ 0.43
CTNND1O60716 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.71■□□□□ 0.43
CTNND1O60716 AC091544.8-201ENST00000619490 361 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms