Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 AC017083.2-201ENST00000608069 979 ntBASIC15.43■□□□□ 0.06
KDELR3O43731 MIR6775-201ENST00000617557 69 ntBASIC15.43■□□□□ 0.06
KDELR3O43731 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.43■□□□□ 0.06
KDELR3O43731 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.43■□□□□ 0.06
KDELR3O43731 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KDELR3O43731 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
KDELR3O43731 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 POM121L8P-201ENST00000417732 1281 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.42■□□□□ 0.06
KDELR3O43731 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.42■□□□□ 0.06
KDELR3O43731 FAM197Y7-201ENST00000432892 766 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 POM121L9P-203ENST00000441984 1285 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 AC022210.1-201ENST00000449856 793 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 CTBP2P5-201ENST00000454986 1264 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 FO681548.1-201ENST00000455617 1132 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.42■□□□□ 0.06
KDELR3O43731 AC104989.1-201ENST00000519711 778 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 IGHV3-71-201ENST00000523324 359 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.42■□□□□ 0.06
KDELR3O43731 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.42■□□□□ 0.06
KDELR3O43731 AC004466.1-201ENST00000599515 1080 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
KDELR3O43731 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 AC144831.1-201ENST00000573312 2656 ntBASIC15.42■□□□□ 0.06
KDELR3O43731 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KDELR3O43731 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.42■□□□□ 0.06
KDELR3O43731 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KDELR3O43731 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KDELR3O43731 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.42■□□□□ 0.06
KDELR3O43731 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KDELR3O43731 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
KDELR3O43731 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 AC006058.4-201ENST00000624016 1670 ntBASIC15.41■□□□□ 0.06
KDELR3O43731 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
KDELR3O43731 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.41■□□□□ 0.06
KDELR3O43731 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
KDELR3O43731 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
KDELR3O43731 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 AC006001.1-201ENST00000325130 474 ntBASIC15.41■□□□□ 0.06
KDELR3O43731 ANKRD19P-201ENST00000338192 862 ntBASIC15.41■□□□□ 0.06
KDELR3O43731 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KDELR3O43731 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
KDELR3O43731 CD8B2-202ENST00000417670 633 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms