Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.53□□□□□ -0.56
SNAI2O43623 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SNAI2O43623 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SNAI2O43623 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
SNAI2O43623 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.53□□□□□ -0.56
SNAI2O43623 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.53□□□□□ -0.56
SNAI2O43623 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
SNAI2O43623 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.53□□□□□ -0.56
SNAI2O43623 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.53□□□□□ -0.56
SNAI2O43623 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.53□□□□□ -0.56
SNAI2O43623 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
SNAI2O43623 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SNAI2O43623 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.52□□□□□ -0.56
SNAI2O43623 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.52□□□□□ -0.56
SNAI2O43623 KRT8P37-201ENST00000451609 1420 ntBASIC11.52□□□□□ -0.56
SNAI2O43623 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.52□□□□□ -0.56
SNAI2O43623 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.52□□□□□ -0.56
SNAI2O43623 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
SNAI2O43623 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.52□□□□□ -0.56
SNAI2O43623 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SNAI2O43623 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.52□□□□□ -0.56
SNAI2O43623 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
SNAI2O43623 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SNAI2O43623 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SNAI2O43623 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SNAI2O43623 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.52□□□□□ -0.56
SNAI2O43623 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
SNAI2O43623 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.52□□□□□ -0.57
SNAI2O43623 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 AC148477.8-201ENST00000624298 468 ntBASIC11.52□□□□□ -0.57
SNAI2O43623 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SNAI2O43623 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.52□□□□□ -0.57
SNAI2O43623 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.52□□□□□ -0.57
SNAI2O43623 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SNAI2O43623 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SNAI2O43623 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SNAI2O43623 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SNAI2O43623 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms