Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FOXN1O15353 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXN1O15353 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FOXN1O15353 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FOXN1O15353 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 KRT18P64-201ENST00000434946 1219 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 TARDBPP1-201ENST00000442013 1203 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXN1O15353 AP001582.1-201ENST00000525856 295 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXN1O15353 AL353770.1-201ENST00000614915 403 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 AC134407.2-201ENST00000625089 1978 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 AC136621.1-201ENST00000624017 2304 ntBASIC18.18■□□□□ 0.5
FOXN1O15353 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
FOXN1O15353 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXN1O15353 AP002414.2-201ENST00000591780 3365 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 AC079178.1-201ENST00000420915 656 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXN1O15353 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 AC011742.3-201ENST00000439053 820 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 ALG1L13P-202ENST00000519320 584 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 DNM1P51-201ENST00000558149 522 ntBASIC18.17■□□□□ 0.5
FOXN1O15353 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.17■□□□□ 0.5
FOXN1O15353 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.17■□□□□ 0.5
FOXN1O15353 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FOXN1O15353 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
FOXN1O15353 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXN1O15353 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXN1O15353 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
FOXN1O15353 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXN1O15353 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXN1O15353 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms