Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 R3HDM2P2-201ENST00000401880 2116 ntBASIC23.75■■□□□ 1.39
CHD1O14646 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD1O14646 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD1O14646 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CHD1O14646 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.75■■□□□ 1.39
CHD1O14646 AC098934.1-203ENST00000442868 1262 ntBASIC23.75■■□□□ 1.39
CHD1O14646 AC027612.2-202ENST00000445955 1199 ntBASIC23.75■■□□□ 1.39
CHD1O14646 AC053503.3-201ENST00000448375 114 ntBASIC23.75■■□□□ 1.39
CHD1O14646 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD1O14646 CASP3-205ENST00000517513 964 ntTSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CHD1O14646 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 AC012508.2-201ENST00000567613 1472 ntBASIC23.75■■□□□ 1.39
CHD1O14646 AC084262.1-201ENST00000567818 751 ntBASIC23.75■■□□□ 1.39
CHD1O14646 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD1O14646 GGNBP1-204ENST00000613113 887 ntBASIC23.75■■□□□ 1.39
CHD1O14646 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHD1O14646 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CHD1O14646 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD1O14646 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD1O14646 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD1O14646 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CHD1O14646 BCRP4-201ENST00000506079 804 ntBASIC23.74■■□□□ 1.39
CHD1O14646 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC23.74■■□□□ 1.39
CHD1O14646 AL132994.1-201ENST00000554098 400 ntBASIC23.74■■□□□ 1.39
CHD1O14646 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC23.74■■□□□ 1.39
CHD1O14646 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC23.74■■□□□ 1.39
CHD1O14646 PSME2-217ENST00000615264 874 ntTSL 5 BASIC23.74■■□□□ 1.39
CHD1O14646 MIR6125-201ENST00000618986 96 ntBASIC23.74■■□□□ 1.39
CHD1O14646 PSME2-218ENST00000630027 185 ntTSL 3 BASIC23.74■■□□□ 1.39
CHD1O14646 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHD1O14646 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD1O14646 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC23.73■■□□□ 1.39
CHD1O14646 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 IFNWP2-201ENST00000431203 580 ntBASIC23.73■■□□□ 1.39
CHD1O14646 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC23.73■■□□□ 1.39
CHD1O14646 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC23.73■■□□□ 1.39
CHD1O14646 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC23.73■■□□□ 1.39
CHD1O14646 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC23.73■■□□□ 1.39
CHD1O14646 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC23.73■■□□□ 1.39
CHD1O14646 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CHD1O14646 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC23.73■■□□□ 1.39
CHD1O14646 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CHD1O14646 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC23.73■■□□□ 1.39
CHD1O14646 AL591122.2-201ENST00000624125 1853 ntBASIC23.73■■□□□ 1.39
CHD1O14646 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 AL121949.3-201ENST00000406684 385 ntBASIC23.73■■□□□ 1.39
CHD1O14646 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC23.73■■□□□ 1.39
CHD1O14646 ANKRD26P1-203ENST00000569528 966 ntBASIC23.73■■□□□ 1.39
CHD1O14646 AL133467.4-201ENST00000602953 725 ntBASIC23.73■■□□□ 1.39
CHD1O14646 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD1O14646 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CHD1O14646 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 CICP11-201ENST00000434745 2827 ntBASIC23.72■■□□□ 1.39
CHD1O14646 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 AC011676.5-201ENST00000624864 2660 ntBASIC23.72■■□□□ 1.39
CHD1O14646 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC23.72■■□□□ 1.39
CHD1O14646 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC23.72■■□□□ 1.39
CHD1O14646 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC23.72■■□□□ 1.39
CHD1O14646 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD1O14646 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC23.72■■□□□ 1.39
CHD1O14646 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD1O14646 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHD1O14646 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC23.71■■□□□ 1.39
CHD1O14646 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms