Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN5O00501 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN5O00501 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN5O00501 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLDN5O00501 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN5O00501 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CLDN5O00501 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.07■□□□□ 0.16
CLDN5O00501 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN5O00501 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN5O00501 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN5O00501 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN5O00501 CSF2RBP1-201ENST00000447905 391 ntBASIC16.07■□□□□ 0.16
CLDN5O00501 AC026434.2-201ENST00000506094 1078 ntBASIC16.07■□□□□ 0.16
CLDN5O00501 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.07■□□□□ 0.16
CLDN5O00501 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CLDN5O00501 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.07■□□□□ 0.16
CLDN5O00501 AC132938.4-201ENST00000623835 848 ntBASIC16.07■□□□□ 0.16
CLDN5O00501 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN5O00501 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN5O00501 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN5O00501 AC068587.6-202ENST00000641839 5619 ntBASIC16.07■□□□□ 0.16
CLDN5O00501 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 AC011270.2-201ENST00000624293 2550 ntBASIC16.06■□□□□ 0.16
CLDN5O00501 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLDN5O00501 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN5O00501 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.06■□□□□ 0.16
CLDN5O00501 RPS2P32-201ENST00000439199 892 ntBASIC16.06■□□□□ 0.16
CLDN5O00501 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.06■□□□□ 0.16
CLDN5O00501 RNA5SP486-201ENST00000515961 83 ntBASIC16.06■□□□□ 0.16
CLDN5O00501 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN5O00501 DUX4L47-201ENST00000566374 394 ntBASIC16.06■□□□□ 0.16
CLDN5O00501 RHOXF1P1-202ENST00000635473 501 ntBASIC16.06■□□□□ 0.16
CLDN5O00501 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN5O00501 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLDN5O00501 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CLDN5O00501 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN5O00501 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN5O00501 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN5O00501 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN5O00501 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLDN5O00501 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN5O00501 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN5O00501 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLDN5O00501 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms