Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.3■□□□□ 0.2
O00370 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.3■□□□□ 0.2
O00370 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
O00370 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
O00370 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
O00370 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
O00370 AJ011931.1-201ENST00000618749 2492 ntBASIC16.29■□□□□ 0.2
O00370 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
O00370 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.29■□□□□ 0.2
O00370 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 AC068587.6-202ENST00000641839 5619 ntBASIC16.29■□□□□ 0.2
O00370 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.29■□□□□ 0.2
O00370 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
O00370 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.29■□□□□ 0.2
O00370 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.29■□□□□ 0.2
O00370 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.29■□□□□ 0.2
O00370 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.29■□□□□ 0.2
O00370 AC005252.2-201ENST00000624630 1141 ntBASIC16.29■□□□□ 0.2
O00370 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.29■□□□□ 0.2
O00370 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
O00370 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
O00370 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
O00370 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.29■□□□□ 0.2
O00370 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
O00370 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
O00370 AC012508.2-201ENST00000567613 1472 ntBASIC16.29■□□□□ 0.2
O00370 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
O00370 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.28■□□□□ 0.2
O00370 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
O00370 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
O00370 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.28■□□□□ 0.2
O00370 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
O00370 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
O00370 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 AC098614.1-201ENST00000368528 745 ntBASIC16.28■□□□□ 0.2
O00370 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
O00370 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.28■□□□□ 0.2
O00370 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 AP006294.1-201ENST00000415407 339 ntBASIC16.28■□□□□ 0.2
O00370 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.28■□□□□ 0.2
O00370 AL162726.2-201ENST00000438986 1017 ntBASIC16.28■□□□□ 0.2
O00370 RN7SL692P-201ENST00000464677 288 ntBASIC16.28■□□□□ 0.2
O00370 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 AL596325.1-201ENST00000563991 1082 ntBASIC16.28■□□□□ 0.2
O00370 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.28■□□□□ 0.2
O00370 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.28■□□□□ 0.2
O00370 LINC02084-201ENST00000606069 1096 ntBASIC16.28■□□□□ 0.2
O00370 RPSAP52-203ENST00000622976 1023 ntBASIC16.28■□□□□ 0.2
O00370 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.28■□□□□ 0.2
O00370 AL033527.5-201ENST00000641382 801 ntBASIC16.28■□□□□ 0.2
O00370 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
O00370 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
O00370 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
O00370 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
O00370 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
O00370 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
O00370 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.28■□□□□ 0.2
O00370 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms