Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
AP3B1O00203 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
AP3B1O00203 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP3B1O00203 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
AP3B1O00203 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.47■□□□□ 0.07
AP3B1O00203 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.47■□□□□ 0.07
AP3B1O00203 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 FAM86LP-201ENST00000478302 853 ntBASIC15.47■□□□□ 0.07
AP3B1O00203 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 AC026410.3-201ENST00000514280 936 ntBASIC15.47■□□□□ 0.07
AP3B1O00203 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.47■□□□□ 0.07
AP3B1O00203 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
AP3B1O00203 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
AP3B1O00203 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
AP3B1O00203 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 AC093525.8-201ENST00000624099 1342 ntBASIC15.46■□□□□ 0.07
AP3B1O00203 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
AP3B1O00203 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
AP3B1O00203 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.46■□□□□ 0.07
AP3B1O00203 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.46■□□□□ 0.07
AP3B1O00203 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.46■□□□□ 0.07
AP3B1O00203 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
AP3B1O00203 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.46■□□□□ 0.07
AP3B1O00203 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
AP3B1O00203 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
AP3B1O00203 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
AP3B1O00203 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.46■□□□□ 0.07
AP3B1O00203 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
AP3B1O00203 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP3B1O00203 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.46■□□□□ 0.06
AP3B1O00203 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.46■□□□□ 0.06
AP3B1O00203 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
AP3B1O00203 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP3B1O00203 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP3B1O00203 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
AP3B1O00203 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
AP3B1O00203 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP3B1O00203 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
AP3B1O00203 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
AP3B1O00203 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms