Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC099336.1-201ENST00000417053 1171 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 CSF2RBP1-201ENST00000447905 391 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AL354718.3-201ENST00000616414 581 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 CR382287.1-201ENST00000623954 586 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC009090.5-201ENST00000624886 2285 ntBASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA2E9PIF3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 FAM86MP-201ENST00000340703 885 ntBASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ACKR1-201ENST00000368121 1240 ntBASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 FAM21FP-201ENST00000426241 1131 ntBASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 RN7SL219P-201ENST00000582872 296 ntBASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 AC244669.2-201ENST00000612320 853 ntBASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA2E9PIF3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms