Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 INE2-201ENST00000630399 1874 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 SPDYE17-201ENST00000412399 783 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 TMEM198B-204ENST00000484016 896 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 KRT8P48-201ENST00000515599 1220 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AL662844.1-201ENST00000546340 181 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 RARRES2P9-201ENST00000565168 469 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AC091812.2-201ENST00000619081 385 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 AGGF1P1-201ENST00000509500 2073 ntBASIC13.32□□□□□ -0.28
SHISA3A0PJX4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHISA3A0PJX4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AC104109.2-201ENST00000602919 1418 ntBASIC13.31□□□□□ -0.28
SHISA3A0PJX4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NUTM2HP-201ENST00000442076 2498 ntBASIC13.31□□□□□ -0.28
SHISA3A0PJX4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 FDX1P1-201ENST00000449115 551 ntBASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 SLED1-202ENST00000512051 380 ntBASIC13.31□□□□□ -0.28
SHISA3A0PJX4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHISA3A0PJX4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms