Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 RPL37AP1-201ENST00000412502 279 ntBASIC13.87□□□□□ -0.19
TMEM129A0AVI4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 AC004890.2-204ENST00000481968 304 ntBASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 AC097359.2-201ENST00000604992 2389 ntBASIC13.87□□□□□ -0.19
TMEM129A0AVI4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM129A0AVI4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 AL589739.1-201ENST00000607720 493 ntBASIC13.86□□□□□ -0.19
TMEM129A0AVI4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 CETN4P-206ENST00000642099 2168 ntBASIC13.86□□□□□ -0.19
TMEM129A0AVI4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM129A0AVI4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 AC018529.2-202ENST00000611482 3087 ntBASIC13.85□□□□□ -0.19
TMEM129A0AVI4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 AL359881.3-201ENST00000602640 1721 ntBASIC13.85□□□□□ -0.19
TMEM129A0AVI4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM129A0AVI4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms