Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC036164.1-201ENST00000570544 333 ntBASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC132938.2-201ENST00000579188 680 ntBASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LINC01115-203ENST00000606068 577 ntBASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL591163.1-201ENST00000641757 987 ntBASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TCRBV4S1A1TA0A5B7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EEF1DP4-201ENST00000446006 880 ntBASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ELK1P1-201ENST00000485699 580 ntBASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms