Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 AC106028.4-201ENST00000614509 607 ntBASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 AC104457.1-201ENST00000401024 814 ntBASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 FAM8A3P-201ENST00000427218 844 ntBASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 AC012508.2-201ENST00000567613 1472 ntBASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA11Q9Y5H2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 AJ011931.1-201ENST00000618749 2492 ntBASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms