Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC006449.6-201ENST00000612330 2296 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 BAK1P1-201ENST00000317045 636 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 PSMD4P1-201ENST00000433951 1109 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC011247.3-201ENST00000603297 438 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC006158.1-201ENST00000610661 249 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AL157813.1-201ENST00000612996 587 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 AC068418.2-201ENST00000577309 3703 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 INE2-201ENST00000630399 1874 ntBASIC17.07■□□□□ 0.32
TRIM17Q9Y577 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM17Q9Y577 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AC090502.4-201ENST00000551714 1386 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 DDX39AP1-201ENST00000445147 1181 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AC004837.1-201ENST00000446267 564 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AC093752.3-201ENST00000567343 901 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AC009884.2-201ENST00000603110 324 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AC005618.3-201ENST00000624928 458 ntBASIC17.06■□□□□ 0.32
TRIM17Q9Y577 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM17Q9Y577 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 HIST2H2BA-201ENST00000412169 381 ntBASIC17.05■□□□□ 0.32
TRIM17Q9Y577 NDUFS6P1-201ENST00000485187 316 ntBASIC17.05■□□□□ 0.32
TRIM17Q9Y577 TMCO5B-205ENST00000530020 894 ntBASIC17.05■□□□□ 0.32
TRIM17Q9Y577 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 AL118516.1-201ENST00000564152 670 ntBASIC17.05■□□□□ 0.32
TRIM17Q9Y577 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM17Q9Y577 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms